Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.59■■□□□ 1.05
SMARCC1Q92922 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.59■■□□□ 1.05
SMARCC1Q92922 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 CYP2A7P1-201ENST00000595391 815 ntBASIC21.59■■□□□ 1.05
SMARCC1Q92922 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 AC133963.1-201ENST00000504166 1679 ntBASIC21.59■■□□□ 1.05
SMARCC1Q92922 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.59■■□□□ 1.05
SMARCC1Q92922 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SMARCC1Q92922 LINC00895-201ENST00000629028 1637 ntBASIC21.58■■□□□ 1.05
SMARCC1Q92922 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC1Q92922 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 HLA-H-201ENST00000383620 1096 ntBASIC21.58■■□□□ 1.05
SMARCC1Q92922 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC1Q92922 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.58■■□□□ 1.05
SMARCC1Q92922 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC1Q92922 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SMARCC1Q92922 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMARCC1Q92922 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
SMARCC1Q92922 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMARCC1Q92922 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SMARCC1Q92922 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.58■■□□□ 1.04
SMARCC1Q92922 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SMARCC1Q92922 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
SMARCC1Q92922 AC138932.1-201ENST00000534164 6830 ntBASIC21.58■■□□□ 1.04
SMARCC1Q92922 AC087499.5-201ENST00000452760 1342 ntBASIC21.57■■□□□ 1.04
SMARCC1Q92922 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 ABALON-201ENST00000629058 1903 ntBASIC21.57■■□□□ 1.04
SMARCC1Q92922 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 TNXA-203ENST00000507684 2038 ntBASIC21.57■■□□□ 1.04
SMARCC1Q92922 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 ATP5G2P4-201ENST00000442175 420 ntBASIC21.57■■□□□ 1.04
SMARCC1Q92922 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.57■■□□□ 1.04
SMARCC1Q92922 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SMARCC1Q92922 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms