Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TTC9Q92623 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC9Q92623 AC023141.5-201ENST00000458585 616 ntBASIC16.26■□□□□ 0.19
TTC9Q92623 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.26■□□□□ 0.19
TTC9Q92623 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TTC9Q92623 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
TTC9Q92623 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.26■□□□□ 0.19
TTC9Q92623 AC005225.4-201ENST00000557330 545 ntBASIC16.26■□□□□ 0.19
TTC9Q92623 AC093520.2-201ENST00000561830 333 ntBASIC16.26■□□□□ 0.19
TTC9Q92623 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.26■□□□□ 0.19
TTC9Q92623 LINC00628-201ENST00000628516 1289 ntBASIC16.26■□□□□ 0.19
TTC9Q92623 AC092902.6-201ENST00000641783 218 ntBASIC16.26■□□□□ 0.19
TTC9Q92623 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TTC9Q92623 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC9Q92623 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC9Q92623 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC9Q92623 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC9Q92623 NCF1C-201ENST00000438382 1427 ntBASIC16.26■□□□□ 0.19
TTC9Q92623 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC9Q92623 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
TTC9Q92623 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TTC9Q92623 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TTC9Q92623 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.26■□□□□ 0.19
TTC9Q92623 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.25■□□□□ 0.19
TTC9Q92623 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
TTC9Q92623 AC008764.6-201ENST00000595909 2069 ntBASIC16.25■□□□□ 0.19
TTC9Q92623 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TTC9Q92623 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC9Q92623 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC9Q92623 AC087641.1-201ENST00000557561 1021 ntBASIC16.25■□□□□ 0.19
TTC9Q92623 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.25■□□□□ 0.19
TTC9Q92623 AC015911.4-201ENST00000588022 1070 ntBASIC16.25■□□□□ 0.19
TTC9Q92623 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.25■□□□□ 0.19
TTC9Q92623 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TTC9Q92623 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 AC025580.3-201ENST00000617932 1424 ntBASIC16.25■□□□□ 0.19
TTC9Q92623 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TTC9Q92623 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TTC9Q92623 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.25■□□□□ 0.19
TTC9Q92623 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.25■□□□□ 0.19
TTC9Q92623 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TTC9Q92623 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TTC9Q92623 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC9Q92623 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TTC9Q92623 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TTC9Q92623 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC9Q92623 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.24■□□□□ 0.19
TTC9Q92623 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
TTC9Q92623 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.24■□□□□ 0.19
TTC9Q92623 AC022145.2-201ENST00000598203 171 ntBASIC16.24■□□□□ 0.19
TTC9Q92623 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.24■□□□□ 0.19
TTC9Q92623 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TTC9Q92623 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
TTC9Q92623 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TTC9Q92623 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
TTC9Q92623 AC006116.8-202ENST00000587620 1550 ntBASIC16.24■□□□□ 0.19
TTC9Q92623 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms