Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 AL138918.1-201ENST00000568306 659 ntBASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAPGEF4Q8WZA2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 AC016396.2-201ENST00000562575 1417 ntBASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 AC092580.3-201ENST00000430932 139 ntBASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 AC012645.4-201ENST00000610691 1061 ntBASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.18■■□□□ 1.14
RAPGEF4Q8WZA2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 AC063926.2-201ENST00000623766 1308 ntBASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAPGEF4Q8WZA2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 AC005225.4-201ENST00000557330 545 ntBASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RAPGEF4Q8WZA2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 CYP2A7P1-201ENST00000595391 815 ntBASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 AC021097.1-201ENST00000607902 574 ntBASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.15■■□□□ 1.14
RAPGEF4Q8WZA2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms