Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 AC128676.1-201ENST00000454392 318 ntBASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SMIM4Q8WVI0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 AC010460.3-201ENST00000511359 1579 ntBASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 NEK4P2-201ENST00000580004 1012 ntBASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 AC097374.2-201ENST00000618617 1306 ntBASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SMIM4Q8WVI0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 AC109462.3-201ENST00000573934 613 ntBASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SMIM4Q8WVI0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms