Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC38A9Q8NBW4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC38A9Q8NBW4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC38A9Q8NBW4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC38A9Q8NBW4 AL355306.1-201ENST00000415580 579 ntBASIC16.02■□□□□ 0.16
SLC38A9Q8NBW4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC38A9Q8NBW4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC38A9Q8NBW4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC38A9Q8NBW4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 TSEN15P1-201ENST00000423257 515 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 AL645939.2-201ENST00000427340 991 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 AL671277.1-201ENST00000429656 993 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 CYMP-203ENST00000474680 1263 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 KRT8P48-201ENST00000515599 1220 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 AC093520.2-201ENST00000561830 333 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 AC005412.3-201ENST00000580309 715 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 AC093028.1-201ENST00000622998 982 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 SLC22A20-204ENST00000530038 1673 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 CROCCP2-202ENST00000412962 2773 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 AC005332.8-201ENST00000622750 2735 ntBASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC38A9Q8NBW4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 AC012569.1-201ENST00000591191 1524 ntBASIC16■□□□□ 0.15
SLC38A9Q8NBW4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 TIMM8BP1-201ENST00000452384 211 ntBASIC16■□□□□ 0.15
SLC38A9Q8NBW4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 DUX4L17-201ENST00000557360 1267 ntBASIC16■□□□□ 0.15
SLC38A9Q8NBW4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 PP12613-201ENST00000424958 2230 ntBASIC16■□□□□ 0.15
SLC38A9Q8NBW4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC38A9Q8NBW4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms