Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 ABALON-201ENST00000629058 1903 ntBASIC23.28■■□□□ 1.32
XRN1Q8IZH2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 AL021920.2-201ENST00000624828 1351 ntBASIC23.28■■□□□ 1.32
XRN1Q8IZH2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 SPDYE19P-201ENST00000338590 713 ntBASIC23.28■■□□□ 1.32
XRN1Q8IZH2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 AC099568.2-201ENST00000609194 695 ntBASIC23.28■■□□□ 1.32
XRN1Q8IZH2 SPTSSB-204ENST00000617024 1292 ntBASIC23.28■■□□□ 1.32
XRN1Q8IZH2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC23.28■■□□□ 1.32
XRN1Q8IZH2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 MIR658-201ENST00000385210 100 ntBASIC23.27■■□□□ 1.32
XRN1Q8IZH2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
XRN1Q8IZH2 AC009113.1-201ENST00000570267 2443 ntBASIC23.27■■□□□ 1.32
XRN1Q8IZH2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 AC108860.2-201ENST00000562760 2183 ntBASIC23.26■■□□□ 1.31
XRN1Q8IZH2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC23.26■■□□□ 1.31
XRN1Q8IZH2 AL023806.1-201ENST00000603994 1649 ntBASIC23.26■■□□□ 1.31
XRN1Q8IZH2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 AC012317.2-201ENST00000623305 2251 ntBASIC23.25■■□□□ 1.31
XRN1Q8IZH2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 BICD1-207ENST00000551848 1962 ntBASIC23.25■■□□□ 1.31
XRN1Q8IZH2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC23.25■■□□□ 1.31
XRN1Q8IZH2 KRT17P8-201ENST00000540749 863 ntBASIC23.25■■□□□ 1.31
XRN1Q8IZH2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 AC044860.1-202ENST00000559481 777 ntBASIC23.24■■□□□ 1.31
XRN1Q8IZH2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC23.24■■□□□ 1.31
XRN1Q8IZH2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC23.23■■□□□ 1.31
XRN1Q8IZH2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms