Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.58■□□□□ 0.4
NPAS3Q8IXF0 AL355312.1-201ENST00000407115 2176 ntBASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 FO538757.1-201ENST00000623083 1397 ntBASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 AC140878.1-201ENST00000565277 250 ntBASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS3Q8IXF0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 WASH6P-202ENST00000359512 1437 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 LETM1P2-201ENST00000597330 2178 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 MIR661-201ENST00000384842 89 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 AC236430.1-201ENST00000402231 743 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 HCG4-201ENST00000418983 998 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 TREML5P-201ENST00000421694 576 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 AC002472.2-201ENST00000442739 958 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 SLC25A39P2-201ENST00000537614 270 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 AC005332.8-201ENST00000622750 2735 ntBASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS3Q8IXF0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 AC133963.1-201ENST00000504166 1679 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 RNU1-129P-201ENST00000384064 167 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 SPDYE7P-202ENST00000420373 878 ntBASIC17.55■□□□□ 0.4
NPAS3Q8IXF0 UGT1A2P-201ENST00000454886 866 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms