Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC83Q8IWF9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 AC132008.2-207ENST00000454517 770 ntBASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 BX005266.1-201ENST00000473402 457 ntBASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC83Q8IWF9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 AC010331.1-201ENST00000611423 582 ntBASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC83Q8IWF9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 AP005117.1-201ENST00000584346 1413 ntBASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 FOSL1P1-201ENST00000511041 816 ntBASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 AL732292.2-201ENST00000609649 430 ntBASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC83Q8IWF9 HLA-A-202ENST00000376806 1854 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms