Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 MYCLP1-201ENST00000372451 1075 ntBASIC16.35■□□□□ 0.21
RAB43Q86YS6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 ELK2BP-201ENST00000415014 1224 ntBASIC16.35■□□□□ 0.21
RAB43Q86YS6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 AC010327.4-202ENST00000591484 748 ntBASIC16.35■□□□□ 0.21
RAB43Q86YS6 AC064836.3-201ENST00000607928 673 ntBASIC16.35■□□□□ 0.21
RAB43Q86YS6 AL691403.2-201ENST00000618460 490 ntBASIC16.35■□□□□ 0.21
RAB43Q86YS6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 YBX2P1-201ENST00000394192 760 ntBASIC16.34■□□□□ 0.21
RAB43Q86YS6 AC004832.2-201ENST00000426397 482 ntBASIC16.34■□□□□ 0.21
RAB43Q86YS6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAB43Q86YS6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.34■□□□□ 0.21
RAB43Q86YS6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.33■□□□□ 0.21
RAB43Q86YS6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.33■□□□□ 0.21
RAB43Q86YS6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.33■□□□□ 0.21
RAB43Q86YS6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
RAB43Q86YS6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.33■□□□□ 0.21
RAB43Q86YS6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.33■□□□□ 0.21
RAB43Q86YS6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB43Q86YS6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAB43Q86YS6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 CRYGEP-201ENST00000412192 528 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 GPX1P2-201ENST00000429271 606 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 AC002558.1-201ENST00000488906 803 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 MIR4751-201ENST00000578027 74 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 STK25P1-201ENST00000585406 838 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 AL139424.1-201ENST00000607572 797 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.33■□□□□ 0.2
RAB43Q86YS6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 AC079781.4-201ENST00000641908 219 ntBASIC16.33■□□□□ 0.2
RAB43Q86YS6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms