Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC25Q86WR0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 AC145285.6-201ENST00000604632 637 ntBASIC17.66■□□□□ 0.42
CCDC25Q86WR0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC25Q86WR0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 AL390719.2-201ENST00000606993 987 ntBASIC17.65■□□□□ 0.42
CCDC25Q86WR0 AC139887.4-201ENST00000607877 719 ntBASIC17.65■□□□□ 0.42
CCDC25Q86WR0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.65■□□□□ 0.42
CCDC25Q86WR0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 Z83836.1-201ENST00000624605 1642 ntBASIC17.65■□□□□ 0.42
CCDC25Q86WR0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC25Q86WR0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms