Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SHFQ7M4L6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SHFQ7M4L6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 LINC01238-205ENST00000567549 1107 ntBASIC15.47■□□□□ 0.07
SHFQ7M4L6 RNF126P1-202ENST00000569893 925 ntBASIC15.47■□□□□ 0.07
SHFQ7M4L6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 AC006011.2-201ENST00000621313 1158 ntBASIC15.47■□□□□ 0.07
SHFQ7M4L6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
SHFQ7M4L6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SHFQ7M4L6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 LINC01023-201ENST00000606054 436 ntBASIC15.46■□□□□ 0.07
SHFQ7M4L6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
SHFQ7M4L6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.46■□□□□ 0.07
SHFQ7M4L6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SHFQ7M4L6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
SHFQ7M4L6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
SHFQ7M4L6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SHFQ7M4L6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.46■□□□□ 0.06
SHFQ7M4L6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.46■□□□□ 0.06
SHFQ7M4L6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHFQ7M4L6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHFQ7M4L6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SHFQ7M4L6 EGFEM1P-202ENST00000431685 1563 ntBASIC15.45■□□□□ 0.06
SHFQ7M4L6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.45■□□□□ 0.06
SHFQ7M4L6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SHFQ7M4L6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms