Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 AC009065.1-201ENST00000564055 1225 ntBASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 AC006538.1-201ENST00000567905 1585 ntBASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 AC009949.1-201ENST00000623048 1830 ntBASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 MTHFR-217ENST00000641820 1569 ntBASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.26□□□□□ -0.29
KCNIP4Q6PIL6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 LINC01311-201ENST00000565162 1445 ntBASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 ESRRAP1-201ENST00000400596 1257 ntBASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 MCCD1P1-208ENST00000445732 328 ntBASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 AC069544.1-201ENST00000609399 999 ntBASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.25□□□□□ -0.29
KCNIP4Q6PIL6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms