Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 AC074386.1-202ENST00000463561 864 ntBASIC20.2■□□□□ 0.82
CTR9Q6PD62 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTR9Q6PD62 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTR9Q6PD62 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTR9Q6PD62 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTR9Q6PD62 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTR9Q6PD62 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTR9Q6PD62 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTR9Q6PD62 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTR9Q6PD62 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTR9Q6PD62 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTR9Q6PD62 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 ALG1L5P-201ENST00000482043 771 ntBASIC20.19■□□□□ 0.82
CTR9Q6PD62 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 MIR3687-2-201ENST00000577708 61 ntBASIC20.19■□□□□ 0.82
CTR9Q6PD62 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 MIR3687-1-201ENST00000614492 61 ntBASIC20.19■□□□□ 0.82
CTR9Q6PD62 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.19■□□□□ 0.82
CTR9Q6PD62 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.19■□□□□ 0.82
CTR9Q6PD62 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 C20orf181-201ENST00000623918 480 ntBASIC20.18■□□□□ 0.82
CTR9Q6PD62 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTR9Q6PD62 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.18■□□□□ 0.82
CTR9Q6PD62 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTR9Q6PD62 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CTR9Q6PD62 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms