Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 UNC93B7-201ENST00000509439 705 ntBASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 AL118508.1-201ENST00000613502 2345 ntBASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 NCF1C-201ENST00000438382 1427 ntBASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF549Q6P9A3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 AL645728.1-201ENST00000366221 2101 ntBASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF549Q6P9A3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 MTDHP4-201ENST00000600287 670 ntBASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 AL589182.2-201ENST00000619332 1049 ntBASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 UBALD1-205ENST00000590891 2641 ntBASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF549Q6P9A3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZNF549Q6P9A3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF549Q6P9A3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF549Q6P9A3 AC243591.1-201ENST00000452967 1364 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms