Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 AC140658.5-201ENST00000438532 169 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SPDYE11-202ENST00000450699 704 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SPDYE9P-201ENST00000570642 692 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 AC011467.4-201ENST00000594891 528 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 AC022145.2-201ENST00000598203 171 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SPDYE10P-202ENST00000612005 668 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SPDYE8P-202ENST00000612377 668 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 AC093028.1-201ENST00000622998 982 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.26■□□□□ 0.35
SDE2Q6IQ49 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.26■□□□□ 0.35
SDE2Q6IQ49 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 MIR770-201ENST00000390219 98 ntBASIC17.25■□□□□ 0.35
SDE2Q6IQ49 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 AC023141.5-201ENST00000458585 616 ntBASIC17.25■□□□□ 0.35
SDE2Q6IQ49 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 AC005412.3-201ENST00000580309 715 ntBASIC17.25■□□□□ 0.35
SDE2Q6IQ49 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 AC012313.1-201ENST00000593393 3059 ntBASIC17.25■□□□□ 0.35
SDE2Q6IQ49 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDE2Q6IQ49 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 AC012317.2-201ENST00000623305 2251 ntBASIC17.24■□□□□ 0.35
SDE2Q6IQ49 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 AC133963.1-201ENST00000504166 1679 ntBASIC17.24■□□□□ 0.35
SDE2Q6IQ49 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 HLA-J-203ENST00000494367 1087 ntBASIC17.24■□□□□ 0.35
SDE2Q6IQ49 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 LINC02084-201ENST00000606069 1096 ntBASIC17.24■□□□□ 0.35
SDE2Q6IQ49 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDE2Q6IQ49 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms