Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 MIR1199-201ENST00000621445 119 ntBASIC14.92□□□□□ -0.02
FAM27BQ5VT28 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.92□□□□□ -0.02
FAM27BQ5VT28 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 TPM4P1-201ENST00000436100 807 ntBASIC14.91□□□□□ -0.02
FAM27BQ5VT28 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 AC087163.2-201ENST00000457299 853 ntBASIC14.91□□□□□ -0.02
FAM27BQ5VT28 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FAM27BQ5VT28 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 TOP3BP1-201ENST00000420768 1380 ntBASIC14.9□□□□□ -0.02
FAM27BQ5VT28 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 AP002469.2-201ENST00000531724 424 ntBASIC14.9□□□□□ -0.02
FAM27BQ5VT28 AL356488.2-201ENST00000602755 427 ntBASIC14.9□□□□□ -0.02
FAM27BQ5VT28 AC008667.4-201ENST00000607370 168 ntBASIC14.9□□□□□ -0.02
FAM27BQ5VT28 AL773604.1-201ENST00000617417 272 ntBASIC14.9□□□□□ -0.02
FAM27BQ5VT28 AC148477.8-201ENST00000624298 468 ntBASIC14.9□□□□□ -0.02
FAM27BQ5VT28 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.9□□□□□ -0.02
FAM27BQ5VT28 AC078925.2-201ENST00000624013 1973 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms