Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.23■□□□□ 0.35
LGSNQ5TDP6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 TERF1P1-201ENST00000311003 1181 ntBASIC17.22■□□□□ 0.35
LGSNQ5TDP6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AC003669.1-201ENST00000334569 611 ntBASIC17.22■□□□□ 0.35
LGSNQ5TDP6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 KRT18P38-201ENST00000449496 1282 ntBASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AC092647.4-201ENST00000457211 535 ntBASIC17.22■□□□□ 0.35
LGSNQ5TDP6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AL353801.3-201ENST00000609898 542 ntBASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AC124864.1-201ENST00000623408 392 ntBASIC17.22■□□□□ 0.35
LGSNQ5TDP6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 AC133561.5-201ENST00000635547 218 ntBASIC17.22■□□□□ 0.35
LGSNQ5TDP6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LGSNQ5TDP6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 AL513523.2-202ENST00000427283 2040 ntBASIC17.21■□□□□ 0.35
LGSNQ5TDP6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 AC079328.2-201ENST00000561241 3354 ntBASIC17.21■□□□□ 0.35
LGSNQ5TDP6 AC046158.3-201ENST00000624947 2558 ntBASIC17.21■□□□□ 0.35
LGSNQ5TDP6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LGSNQ5TDP6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms