Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.22■□□□□ 0.99
RC3H1Q5TC82 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 AC138969.3-201ENST00000546612 1459 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 AC138932.2-201ENST00000548268 1459 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 AC126755.4-201ENST00000549796 1459 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 AL133215.2-201ENST00000609242 977 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 AC104581.1-202ENST00000635932 2618 ntBASIC21.21■□□□□ 0.99
RC3H1Q5TC82 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RC3H1Q5TC82 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 BTBD7P1-201ENST00000447253 1453 ntBASIC21.2■□□□□ 0.98
RC3H1Q5TC82 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 GPR53P-205ENST00000457298 1084 ntBASIC21.2■□□□□ 0.98
RC3H1Q5TC82 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RC3H1Q5TC82 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 AC098859.1-201ENST00000502915 1238 ntBASIC21.19■□□□□ 0.98
RC3H1Q5TC82 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RC3H1Q5TC82 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 DFFBP1-201ENST00000433250 979 ntBASIC21.18■□□□□ 0.98
RC3H1Q5TC82 MTND6P24-201ENST00000440466 518 ntBASIC21.18■□□□□ 0.98
RC3H1Q5TC82 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 IGHV3-71-201ENST00000523324 359 ntBASIC21.18■□□□□ 0.98
RC3H1Q5TC82 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 AC105021.1-202ENST00000570572 669 ntBASIC21.18■□□□□ 0.98
RC3H1Q5TC82 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RC3H1Q5TC82 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms