Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 VENTXP7-201ENST00000475503 772 ntBASIC16.9■□□□□ 0.3
CCDC153Q494R4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 AC011498.5-201ENST00000592027 486 ntBASIC16.9■□□□□ 0.3
CCDC153Q494R4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 AC073592.5-201ENST00000624854 528 ntBASIC16.9■□□□□ 0.3
CCDC153Q494R4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC153Q494R4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC153Q494R4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC153Q494R4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC153Q494R4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC153Q494R4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 AL662844.4-201ENST00000606367 2838 ntBASIC16.89■□□□□ 0.29
CCDC153Q494R4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.89■□□□□ 0.29
CCDC153Q494R4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 KRT8P26-201ENST00000534154 1276 ntBASIC16.89■□□□□ 0.29
CCDC153Q494R4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC153Q494R4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC153Q494R4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 AC022188.1-201ENST00000620960 1664 ntBASIC16.88■□□□□ 0.29
CCDC153Q494R4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 LINC01238-205ENST00000567549 1107 ntBASIC16.88■□□□□ 0.29
CCDC153Q494R4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CCDC153Q494R4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC153Q494R4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms