Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 EGFEM1P-202ENST00000431685 1563 ntBASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 AC097488.1-201ENST00000507834 756 ntBASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 DGCR10-201ENST00000609839 495 ntBASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 FAM197Y4-202ENST00000622692 608 ntBASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 AL596087.1-201ENST00000400979 1969 ntBASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.1■□□□□ 0.49
ERCC6LQ2NKX8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC6LQ2NKX8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC6LQ2NKX8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.08■□□□□ 0.49
ERCC6LQ2NKX8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
ERCC6LQ2NKX8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC6LQ2NKX8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC6LQ2NKX8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.08■□□□□ 0.49
ERCC6LQ2NKX8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 SEC1P-202ENST00000473944 940 ntBASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 AC002558.1-201ENST00000488906 803 ntBASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 RPPH1-201ENST00000516869 333 ntBASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ERCC6LQ2NKX8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ERCC6LQ2NKX8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms