Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO4Q2I0M5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 AP3S2-216ENST00000617003 1561 ntBASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 MIR1908-201ENST00000410394 80 ntBASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 TMEM14DP-201ENST00000422205 345 ntBASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 AC093004.1-201ENST00000508850 424 ntBASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 WIZP1-201ENST00000531444 2299 ntBASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO4Q2I0M5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 AC104989.1-201ENST00000519711 778 ntBASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 AC005412.3-201ENST00000580309 715 ntBASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 AL031598.1-201ENST00000561511 1773 ntBASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO4Q2I0M5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 PHGDH-209ENST00000641074 1780 ntBASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RSPO4Q2I0M5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms