Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 ACTG1P4-201ENST00000425123 1122 ntBASIC16.45■□□□□ 0.22
HMGCS1Q01581 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 AL603756.1-201ENST00000606511 2163 ntBASIC16.45■□□□□ 0.22
HMGCS1Q01581 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
HMGCS1Q01581 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HMGCS1Q01581 SIGLEC16-201ENST00000599858 1437 ntBASIC16.45■□□□□ 0.22
HMGCS1Q01581 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 AC079776.2-201ENST00000641154 1609 ntBASIC16.44■□□□□ 0.22
HMGCS1Q01581 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HMGCS1Q01581 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGCS1Q01581 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 AL645728.1-201ENST00000366221 2101 ntBASIC16.43■□□□□ 0.22
HMGCS1Q01581 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGCS1Q01581 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCS1Q01581 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms