Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRA2BP62995 AL391256.1-201ENST00000443260 1855 ntBASIC16.08■□□□□ 0.16
TRA2BP62995 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.07■□□□□ 0.16
TRA2BP62995 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.07■□□□□ 0.16
TRA2BP62995 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 AC004870.1-201ENST00000315132 882 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.07■□□□□ 0.16
TRA2BP62995 AC073621.1-201ENST00000392730 636 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 RPS2P1-201ENST00000434010 821 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 AC018712.1-201ENST00000455767 687 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.07■□□□□ 0.16
TRA2BP62995 AC087163.2-201ENST00000457299 853 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 AF186996.4-201ENST00000467186 377 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 HLA-J-202ENST00000469281 1241 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.07■□□□□ 0.16
TRA2BP62995 AC136632.2-201ENST00000512891 861 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.07■□□□□ 0.16
TRA2BP62995 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.07■□□□□ 0.16
TRA2BP62995 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 AC008735.5-201ENST00000623544 497 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.07■□□□□ 0.16
TRA2BP62995 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRA2BP62995 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.07■□□□□ 0.16
TRA2BP62995 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.07■□□□□ 0.16
TRA2BP62995 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.07■□□□□ 0.16
TRA2BP62995 AL645728.1-201ENST00000366221 2101 ntBASIC16.07■□□□□ 0.16
TRA2BP62995 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.07■□□□□ 0.16
TRA2BP62995 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TRA2BP62995 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
TRA2BP62995 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
TRA2BP62995 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.07■□□□□ 0.16
TRA2BP62995 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRA2BP62995 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRA2BP62995 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
TRA2BP62995 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
TRA2BP62995 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 AL450487.1-201ENST00000426799 995 ntBASIC16.06■□□□□ 0.16
TRA2BP62995 KRT18P67-201ENST00000432816 1264 ntBASIC16.06■□□□□ 0.16
TRA2BP62995 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.06■□□□□ 0.16
TRA2BP62995 RPS15P9-201ENST00000494093 319 ntBASIC16.06■□□□□ 0.16
TRA2BP62995 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.06■□□□□ 0.16
TRA2BP62995 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.06■□□□□ 0.16
TRA2BP62995 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRA2BP62995 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRA2BP62995 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.06■□□□□ 0.16
TRA2BP62995 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRA2BP62995 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRA2BP62995 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRA2BP62995 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRA2BP62995 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRA2BP62995 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.05■□□□□ 0.16
TRA2BP62995 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.05■□□□□ 0.16
TRA2BP62995 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRA2BP62995 FLJ38576-201ENST00000623820 2459 ntBASIC16.05■□□□□ 0.16
TRA2BP62995 RNF216P1-203ENST00000404404 2427 ntBASIC16.05■□□□□ 0.16
TRA2BP62995 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRA2BP62995 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRA2BP62995 AC002310.6-201ENST00000624451 1377 ntBASIC16.05■□□□□ 0.16
TRA2BP62995 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms