Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HERVK_113P62684 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HERVK_113P62684 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.7■□□□□ 0.74
HERVK_113P62684 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.7■□□□□ 0.74
HERVK_113P62684 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.7■□□□□ 0.74
HERVK_113P62684 AL135744.1-201ENST00000565098 629 ntBASIC19.7■□□□□ 0.74
HERVK_113P62684 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.7■□□□□ 0.74
HERVK_113P62684 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HERVK_113P62684 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.7■□□□□ 0.74
HERVK_113P62684 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
HERVK_113P62684 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
HERVK_113P62684 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.7■□□□□ 0.74
HERVK_113P62684 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.7■□□□□ 0.74
HERVK_113P62684 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERVK_113P62684 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HERVK_113P62684 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HERVK_113P62684 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.69■□□□□ 0.74
HERVK_113P62684 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.69■□□□□ 0.74
HERVK_113P62684 AC009053.2-201ENST00000563701 2365 ntBASIC19.69■□□□□ 0.74
HERVK_113P62684 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.69■□□□□ 0.74
HERVK_113P62684 AC108860.2-201ENST00000562760 2183 ntBASIC19.69■□□□□ 0.74
HERVK_113P62684 PRORSD1P-202ENST00000563365 2154 ntBASIC19.69■□□□□ 0.74
HERVK_113P62684 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HERVK_113P62684 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 FAM58DP-201ENST00000428076 619 ntBASIC19.69■□□□□ 0.74
HERVK_113P62684 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.69■□□□□ 0.74
HERVK_113P62684 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.69■□□□□ 0.74
HERVK_113P62684 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.69■□□□□ 0.74
HERVK_113P62684 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 AC069335.1-201ENST00000489972 472 ntBASIC19.69■□□□□ 0.74
HERVK_113P62684 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.69■□□□□ 0.74
HERVK_113P62684 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.69■□□□□ 0.74
HERVK_113P62684 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.69■□□□□ 0.74
HERVK_113P62684 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.69■□□□□ 0.74
HERVK_113P62684 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HERVK_113P62684 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.69■□□□□ 0.74
HERVK_113P62684 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.69■□□□□ 0.74
HERVK_113P62684 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.69■□□□□ 0.74
HERVK_113P62684 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.69■□□□□ 0.74
HERVK_113P62684 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.69■□□□□ 0.74
HERVK_113P62684 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HERVK_113P62684 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.68■□□□□ 0.74
HERVK_113P62684 KRT18P32-201ENST00000424695 1287 ntBASIC19.68■□□□□ 0.74
HERVK_113P62684 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.68■□□□□ 0.74
HERVK_113P62684 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.68■□□□□ 0.74
HERVK_113P62684 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.68■□□□□ 0.74
HERVK_113P62684 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.68■□□□□ 0.74
HERVK_113P62684 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.68■□□□□ 0.74
HERVK_113P62684 RARRES2P8-201ENST00000566335 367 ntBASIC19.68■□□□□ 0.74
HERVK_113P62684 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.68■□□□□ 0.74
HERVK_113P62684 AC138761.1-201ENST00000584393 385 ntBASIC19.68■□□□□ 0.74
HERVK_113P62684 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.68■□□□□ 0.74
HERVK_113P62684 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.68■□□□□ 0.74
HERVK_113P62684 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HERVK_113P62684 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.68■□□□□ 0.74
HERVK_113P62684 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HERVK_113P62684 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERVK_113P62684 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.67■□□□□ 0.74
HERVK_113P62684 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 PCDHA12-202ENST00000613593 2588 ntBASIC19.67■□□□□ 0.74
HERVK_113P62684 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.67■□□□□ 0.74
HERVK_113P62684 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERVK_113P62684 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms