Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 DDX43P3-201ENST00000441064 443 ntBASIC15.97■□□□□ 0.15
CDH15P55291 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH15P55291 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH15P55291 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CDH15P55291 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CDH15P55291 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH15P55291 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH15P55291 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH15P55291 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH15P55291 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH15P55291 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH15P55291 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.97■□□□□ 0.15
CDH15P55291 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH15P55291 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH15P55291 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDH15P55291 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH15P55291 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH15P55291 LINC00167-201ENST00000530583 1419 ntBASIC15.96■□□□□ 0.15
CDH15P55291 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH15P55291 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH15P55291 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH15P55291 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH15P55291 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CDH15P55291 RNF152P1-201ENST00000397754 604 ntBASIC15.96■□□□□ 0.15
CDH15P55291 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH15P55291 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.96■□□□□ 0.15
CDH15P55291 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH15P55291 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CDH15P55291 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CDH15P55291 AL023803.3-201ENST00000615559 522 ntBASIC15.96■□□□□ 0.15
CDH15P55291 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH15P55291 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDH15P55291 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH15P55291 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.96■□□□□ 0.14
CDH15P55291 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH15P55291 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.96■□□□□ 0.14
CDH15P55291 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH15P55291 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH15P55291 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH15P55291 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH15P55291 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH15P55291 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CDH15P55291 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH15P55291 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH15P55291 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH15P55291 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH15P55291 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH15P55291 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH15P55291 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH15P55291 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.95■□□□□ 0.14
CDH15P55291 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH15P55291 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
CDH15P55291 AC139887.4-201ENST00000607877 719 ntBASIC15.95■□□□□ 0.14
CDH15P55291 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDH15P55291 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH15P55291 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH15P55291 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms