Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH13P55290 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH13P55290 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH13P55290 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CDH13P55290 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH13P55290 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDH13P55290 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CDH13P55290 FAM210CP-201ENST00000445714 574 ntBASIC16.71■□□□□ 0.27
CDH13P55290 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH13P55290 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH13P55290 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH13P55290 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH13P55290 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.71■□□□□ 0.27
CDH13P55290 MIR3180-1-201ENST00000580374 94 ntBASIC16.71■□□□□ 0.27
CDH13P55290 MIR3180-3-201ENST00000584616 94 ntBASIC16.71■□□□□ 0.27
CDH13P55290 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CDH13P55290 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH13P55290 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH13P55290 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDH13P55290 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH13P55290 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.71■□□□□ 0.26
CDH13P55290 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.71■□□□□ 0.26
CDH13P55290 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.71■□□□□ 0.26
CDH13P55290 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDH13P55290 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
CDH13P55290 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDH13P55290 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH13P55290 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 AL645728.1-201ENST00000366221 2101 ntBASIC16.7■□□□□ 0.26
CDH13P55290 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CDH13P55290 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CDH13P55290 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH13P55290 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDH13P55290 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH13P55290 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH13P55290 NUS1P1-201ENST00000446295 882 ntBASIC16.7■□□□□ 0.26
CDH13P55290 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.7■□□□□ 0.26
CDH13P55290 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.7■□□□□ 0.26
CDH13P55290 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH13P55290 AP000867.3-201ENST00000524675 377 ntBASIC16.7■□□□□ 0.26
CDH13P55290 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH13P55290 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH13P55290 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.7■□□□□ 0.26
CDH13P55290 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH13P55290 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CDH13P55290 AL590326.2-201ENST00000625139 305 ntBASIC16.7■□□□□ 0.26
CDH13P55290 AP000867.4-201ENST00000641616 219 ntBASIC16.7■□□□□ 0.26
CDH13P55290 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH13P55290 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH13P55290 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH13P55290 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH13P55290 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDH13P55290 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH13P55290 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH13P55290 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH13P55290 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CDH13P55290 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH13P55290 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH13P55290 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CDH13P55290 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH13P55290 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms