Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.94■□□□□ 0.3
ZNF140P52738 AC098831.1-202ENST00000438821 336 ntBASIC16.94■□□□□ 0.3
ZNF140P52738 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.94■□□□□ 0.3
ZNF140P52738 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.94■□□□□ 0.3
ZNF140P52738 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.94■□□□□ 0.3
ZNF140P52738 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.94■□□□□ 0.3
ZNF140P52738 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.94■□□□□ 0.3
ZNF140P52738 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ZNF140P52738 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ZNF140P52738 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.94■□□□□ 0.3
ZNF140P52738 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
ZNF140P52738 AC116407.3-201ENST00000623905 1129 ntBASIC16.94■□□□□ 0.3
ZNF140P52738 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
ZNF140P52738 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ZNF140P52738 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.94■□□□□ 0.3
ZNF140P52738 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF140P52738 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ZNF140P52738 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF140P52738 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ZNF140P52738 OR6D1P-202ENST00000641007 5290 ntBASIC16.93■□□□□ 0.3
ZNF140P52738 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF140P52738 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ZNF140P52738 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF140P52738 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ZNF140P52738 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 OR7E47P-204ENST00000575924 449 ntBASIC16.93■□□□□ 0.3
ZNF140P52738 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF140P52738 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.93■□□□□ 0.3
ZNF140P52738 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF140P52738 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF140P52738 AL391256.1-201ENST00000443260 1855 ntBASIC16.93■□□□□ 0.3
ZNF140P52738 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF140P52738 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF140P52738 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF140P52738 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF140P52738 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 AC093909.1-201ENST00000504731 1122 ntBASIC16.92■□□□□ 0.3
ZNF140P52738 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 IGHV3-22-201ENST00000520721 359 ntBASIC16.92■□□□□ 0.3
ZNF140P52738 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF140P52738 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.92■□□□□ 0.3
ZNF140P52738 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF140P52738 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms