Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.57■□□□□ 0.24
CLCN2P51788 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLCN2P51788 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN2P51788 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLCN2P51788 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN2P51788 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN2P51788 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CLCN2P51788 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN2P51788 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.57■□□□□ 0.24
CLCN2P51788 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN2P51788 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
CLCN2P51788 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCN2P51788 UNC93B7-201ENST00000509439 705 ntBASIC16.56■□□□□ 0.24
CLCN2P51788 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.56■□□□□ 0.24
CLCN2P51788 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN2P51788 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN2P51788 AC060834.1-201ENST00000443027 2032 ntBASIC16.56■□□□□ 0.24
CLCN2P51788 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
CLCN2P51788 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN2P51788 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN2P51788 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLCN2P51788 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CLCN2P51788 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN2P51788 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 RCN1P2-201ENST00000398357 915 ntBASIC16.55■□□□□ 0.24
CLCN2P51788 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
CLCN2P51788 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN2P51788 FAAHP1-202ENST00000446499 1238 ntBASIC16.55■□□□□ 0.24
CLCN2P51788 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.55■□□□□ 0.24
CLCN2P51788 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 AC011467.2-201ENST00000598425 242 ntBASIC16.55■□□□□ 0.24
CLCN2P51788 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.55■□□□□ 0.24
CLCN2P51788 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN2P51788 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN2P51788 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN2P51788 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms