Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MMP13P45452 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP13P45452 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
MMP13P45452 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP13P45452 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP13P45452 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP13P45452 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
MMP13P45452 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP13P45452 RNF216P1-203ENST00000404404 2427 ntBASIC17.77■□□□□ 0.43
MMP13P45452 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
MMP13P45452 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP13P45452 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MMP13P45452 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MMP13P45452 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
MMP13P45452 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP13P45452 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP13P45452 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
MMP13P45452 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP13P45452 RBM17P3-201ENST00000417687 1192 ntBASIC17.76■□□□□ 0.43
MMP13P45452 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP13P45452 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
MMP13P45452 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP13P45452 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.76■□□□□ 0.43
MMP13P45452 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.76■□□□□ 0.43
MMP13P45452 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MMP13P45452 REXO1L6P-202ENST00000619970 1078 ntBASIC17.76■□□□□ 0.43
MMP13P45452 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP13P45452 AC078925.2-201ENST00000624013 1973 ntBASIC17.76■□□□□ 0.43
MMP13P45452 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
MMP13P45452 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP13P45452 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP13P45452 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.76■□□□□ 0.43
MMP13P45452 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP13P45452 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.76■□□□□ 0.43
MMP13P45452 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MMP13P45452 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MMP13P45452 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP13P45452 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.75■□□□□ 0.43
MMP13P45452 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
MMP13P45452 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
MMP13P45452 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 SPDYE21P-201ENST00000413323 827 ntBASIC17.75■□□□□ 0.43
MMP13P45452 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 AL020989.1-201ENST00000422979 469 ntBASIC17.75■□□□□ 0.43
MMP13P45452 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MMP13P45452 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MMP13P45452 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 LINC02012-201ENST00000608206 1725 ntBASIC17.75■□□□□ 0.43
MMP13P45452 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MMP13P45452 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
MMP13P45452 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP13P45452 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP13P45452 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP13P45452 CYP2T1P-202ENST00000641596 2535 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms