Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NCAPD3P42695 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC29.58■■■□□ 2.33
NCAPD3P42695 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC29.58■■■□□ 2.33
NCAPD3P42695 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC29.57■■■□□ 2.32
NCAPD3P42695 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
NCAPD3P42695 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC29.57■■■□□ 2.32
NCAPD3P42695 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC29.57■■■□□ 2.32
NCAPD3P42695 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC29.57■■■□□ 2.32
NCAPD3P42695 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NCAPD3P42695 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC29.57■■■□□ 2.32
NCAPD3P42695 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC29.57■■■□□ 2.32
NCAPD3P42695 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
NCAPD3P42695 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NCAPD3P42695 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
NCAPD3P42695 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NCAPD3P42695 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
NCAPD3P42695 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
NCAPD3P42695 PODN-203ENST00000395871 2744 ntTSL 5 BASIC29.57■■■□□ 2.32
NCAPD3P42695 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC29.56■■■□□ 2.32
NCAPD3P42695 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
NCAPD3P42695 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
NCAPD3P42695 STX1A-203ENST00000395155 783 ntTSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
NCAPD3P42695 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
NCAPD3P42695 SDHAP3-202ENST00000515467 728 ntBASIC29.56■■■□□ 2.32
NCAPD3P42695 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 RPS24-214ENST00000613865 538 ntTSL 5 BASIC29.56■■■□□ 2.32
NCAPD3P42695 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC29.56■■■□□ 2.32
NCAPD3P42695 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
NCAPD3P42695 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC29.56■■■□□ 2.32
NCAPD3P42695 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
NCAPD3P42695 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
NCAPD3P42695 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
NCAPD3P42695 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC29.56■■■□□ 2.32
NCAPD3P42695 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
NCAPD3P42695 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
NCAPD3P42695 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC29.56■■■□□ 2.32
NCAPD3P42695 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
NCAPD3P42695 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC29.55■■■□□ 2.32
NCAPD3P42695 HLA-DPB2-205ENST00000435074 1188 ntBASIC29.55■■■□□ 2.32
NCAPD3P42695 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC29.55■■■□□ 2.32
NCAPD3P42695 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC29.55■■■□□ 2.32
NCAPD3P42695 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC29.55■■■□□ 2.32
NCAPD3P42695 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC29.55■■■□□ 2.32
NCAPD3P42695 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC29.55■■■□□ 2.32
NCAPD3P42695 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC29.55■■■□□ 2.32
NCAPD3P42695 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC29.55■■■□□ 2.32
NCAPD3P42695 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC29.55■■■□□ 2.32
NCAPD3P42695 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC29.55■■■□□ 2.32
NCAPD3P42695 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NCAPD3P42695 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
NCAPD3P42695 FADS2-205ENST00000517839 469 ntTSL 3 BASIC29.55■■■□□ 2.32
NCAPD3P42695 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC29.55■■■□□ 2.32
NCAPD3P42695 AC010319.3-201ENST00000597028 470 ntBASIC29.55■■■□□ 2.32
NCAPD3P42695 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC29.55■■■□□ 2.32
NCAPD3P42695 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
NCAPD3P42695 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC29.54■■■□□ 2.32
NCAPD3P42695 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
NCAPD3P42695 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC29.54■■■□□ 2.32
NCAPD3P42695 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
NCAPD3P42695 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC29.54■■■□□ 2.32
NCAPD3P42695 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC29.54■■■□□ 2.32
NCAPD3P42695 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
NCAPD3P42695 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC29.54■■■□□ 2.32
NCAPD3P42695 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC29.54■■■□□ 2.32
NCAPD3P42695 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC29.54■■■□□ 2.32
NCAPD3P42695 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC29.54■■■□□ 2.32
NCAPD3P42695 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
NCAPD3P42695 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
NCAPD3P42695 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC29.54■■■□□ 2.32
NCAPD3P42695 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC29.54■■■□□ 2.32
NCAPD3P42695 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC29.54■■■□□ 2.32
NCAPD3P42695 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC29.54■■■□□ 2.32
NCAPD3P42695 MIR8072-201ENST00000614241 80 ntBASIC29.54■■■□□ 2.32
NCAPD3P42695 AC093525.8-201ENST00000624099 1342 ntBASIC29.54■■■□□ 2.32
NCAPD3P42695 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
NCAPD3P42695 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
NCAPD3P42695 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
NCAPD3P42695 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
NCAPD3P42695 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NCAPD3P42695 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NCAPD3P42695 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
NCAPD3P42695 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
NCAPD3P42695 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
NCAPD3P42695 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC29.53■■■□□ 2.32
NCAPD3P42695 IMPDH1P4-201ENST00000445028 1534 ntBASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms