Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.39■□□□□ 0.69
CNGA1P29973 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNGA1P29973 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CNGA1P29973 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNGA1P29973 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CNGA1P29973 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CNGA1P29973 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.38■□□□□ 0.69
CNGA1P29973 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.38■□□□□ 0.69
CNGA1P29973 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.38■□□□□ 0.69
CNGA1P29973 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CNGA1P29973 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.38■□□□□ 0.69
CNGA1P29973 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
CNGA1P29973 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.38■□□□□ 0.69
CNGA1P29973 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.38■□□□□ 0.69
CNGA1P29973 BASP1P1-201ENST00000430708 665 ntBASIC19.38■□□□□ 0.69
CNGA1P29973 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.38■□□□□ 0.69
CNGA1P29973 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.38■□□□□ 0.69
CNGA1P29973 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 SLC25A6P2-201ENST00000497974 877 ntBASIC19.38■□□□□ 0.69
CNGA1P29973 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CNGA1P29973 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.38■□□□□ 0.69
CNGA1P29973 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.38■□□□□ 0.69
CNGA1P29973 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.38■□□□□ 0.69
CNGA1P29973 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 AC099522.2-201ENST00000607001 744 ntBASIC19.38■□□□□ 0.69
CNGA1P29973 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.38■□□□□ 0.69
CNGA1P29973 AC129492.6-201ENST00000611383 1305 ntBASIC19.38■□□□□ 0.69
CNGA1P29973 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.38■□□□□ 0.69
CNGA1P29973 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.38■□□□□ 0.69
CNGA1P29973 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CNGA1P29973 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNGA1P29973 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.37■□□□□ 0.69
CNGA1P29973 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.37■□□□□ 0.69
CNGA1P29973 AL135999.2-201ENST00000622438 1686 ntBASIC19.37■□□□□ 0.69
CNGA1P29973 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.37■□□□□ 0.69
CNGA1P29973 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 MIR943-201ENST00000401286 94 ntBASIC19.37■□□□□ 0.69
CNGA1P29973 AC055876.3-201ENST00000431496 288 ntBASIC19.37■□□□□ 0.69
CNGA1P29973 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 AC087163.2-201ENST00000457299 853 ntBASIC19.37■□□□□ 0.69
CNGA1P29973 AC079140.1-201ENST00000508039 487 ntBASIC19.37■□□□□ 0.69
CNGA1P29973 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.37■□□□□ 0.69
CNGA1P29973 AC015911.4-201ENST00000588022 1070 ntBASIC19.37■□□□□ 0.69
CNGA1P29973 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.37■□□□□ 0.69
CNGA1P29973 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 AC138649.4-201ENST00000612222 287 ntBASIC19.37■□□□□ 0.69
CNGA1P29973 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CNGA1P29973 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CNGA1P29973 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNGA1P29973 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.36■□□□□ 0.69
CNGA1P29973 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CNGA1P29973 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CNGA1P29973 TUBB3P1-201ENST00000405796 1332 ntBASIC19.36■□□□□ 0.69
CNGA1P29973 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CNGA1P29973 AC236430.1-201ENST00000402231 743 ntBASIC19.36■□□□□ 0.69
CNGA1P29973 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.36■□□□□ 0.69
CNGA1P29973 TFAMP1-201ENST00000412727 736 ntBASIC19.36■□□□□ 0.69
CNGA1P29973 AC140658.5-201ENST00000438532 169 ntBASIC19.36■□□□□ 0.69
CNGA1P29973 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.36■□□□□ 0.69
CNGA1P29973 AC069335.1-201ENST00000489972 472 ntBASIC19.36■□□□□ 0.69
CNGA1P29973 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CNGA1P29973 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.36■□□□□ 0.69
CNGA1P29973 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 AC046185.3-201ENST00000623228 1824 ntBASIC19.36■□□□□ 0.69
CNGA1P29973 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CNGA1P29973 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CNGA1P29973 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CNGA1P29973 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNGA1P29973 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CNGA1P29973 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms