Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.46□□□□□ -0.09
VAMP1P23763 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAMP1P23763 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.46□□□□□ -0.09
VAMP1P23763 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VAMP1P23763 SLC25A1P2-201ENST00000430693 912 ntBASIC14.46□□□□□ -0.09
VAMP1P23763 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.46□□□□□ -0.09
VAMP1P23763 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.46□□□□□ -0.09
VAMP1P23763 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.46□□□□□ -0.09
VAMP1P23763 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAMP1P23763 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.46□□□□□ -0.09
VAMP1P23763 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAMP1P23763 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
VAMP1P23763 AC006058.3-201ENST00000606217 1069 ntBASIC14.46□□□□□ -0.09
VAMP1P23763 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.46□□□□□ -0.09
VAMP1P23763 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.46□□□□□ -0.09
VAMP1P23763 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
VAMP1P23763 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.46□□□□□ -0.09
VAMP1P23763 DBET-201ENST00000630918 3363 ntBASIC14.46□□□□□ -0.1
VAMP1P23763 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VAMP1P23763 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.1
VAMP1P23763 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
VAMP1P23763 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VAMP1P23763 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.45□□□□□ -0.1
VAMP1P23763 SLC25A1P3-201ENST00000395415 828 ntBASIC14.45□□□□□ -0.1
VAMP1P23763 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 SEC1P-202ENST00000473944 940 ntBASIC14.45□□□□□ -0.1
VAMP1P23763 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 AC113404.2-201ENST00000507884 177 ntBASIC14.45□□□□□ -0.1
VAMP1P23763 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.45□□□□□ -0.1
VAMP1P23763 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.45□□□□□ -0.1
VAMP1P23763 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 AC024243.1-201ENST00000609234 778 ntBASIC14.45□□□□□ -0.1
VAMP1P23763 AL023803.3-201ENST00000615559 522 ntBASIC14.45□□□□□ -0.1
VAMP1P23763 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VAMP1P23763 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
VAMP1P23763 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.45□□□□□ -0.1
VAMP1P23763 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VAMP1P23763 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
VAMP1P23763 AP002414.2-201ENST00000591780 3365 ntBASIC14.45□□□□□ -0.1
VAMP1P23763 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VAMP1P23763 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAMP1P23763 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.45□□□□□ -0.1
VAMP1P23763 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VAMP1P23763 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.44□□□□□ -0.1
VAMP1P23763 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VAMP1P23763 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 AC092850.2-201ENST00000623821 2697 ntBASIC14.44□□□□□ -0.1
VAMP1P23763 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.44□□□□□ -0.1
VAMP1P23763 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
VAMP1P23763 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VAMP1P23763 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.44□□□□□ -0.1
VAMP1P23763 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.44□□□□□ -0.1
VAMP1P23763 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.44□□□□□ -0.1
VAMP1P23763 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms