Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 VENTXP7-201ENST00000475503 772 ntBASIC15.71■□□□□ 0.11
BMP4P12644 GUSBP12-201ENST00000513727 720 ntBASIC15.71■□□□□ 0.11
BMP4P12644 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.71■□□□□ 0.11
BMP4P12644 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.71■□□□□ 0.11
BMP4P12644 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
BMP4P12644 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.71■□□□□ 0.11
BMP4P12644 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.71■□□□□ 0.11
BMP4P12644 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BMP4P12644 IGHV3-41-201ENST00000613121 348 ntBASIC15.71■□□□□ 0.11
BMP4P12644 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
BMP4P12644 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.71■□□□□ 0.11
BMP4P12644 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BMP4P12644 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
BMP4P12644 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
BMP4P12644 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
BMP4P12644 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BMP4P12644 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
BMP4P12644 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BMP4P12644 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.71■□□□□ 0.11
BMP4P12644 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BMP4P12644 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BMP4P12644 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BMP4P12644 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
BMP4P12644 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
BMP4P12644 FER1L4-210ENST00000615531 5998 ntBASIC15.71■□□□□ 0.1
BMP4P12644 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BMP4P12644 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
BMP4P12644 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BMP4P12644 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
BMP4P12644 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.7■□□□□ 0.1
BMP4P12644 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
BMP4P12644 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.7■□□□□ 0.1
BMP4P12644 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.7■□□□□ 0.1
BMP4P12644 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 AC144831.1-201ENST00000573312 2656 ntBASIC15.7■□□□□ 0.1
BMP4P12644 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BMP4P12644 DUSP5P1-201ENST00000441325 1139 ntBASIC15.7■□□□□ 0.1
BMP4P12644 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BMP4P12644 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.7■□□□□ 0.1
BMP4P12644 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.7■□□□□ 0.1
BMP4P12644 AP002414.4-201ENST00000589764 1148 ntBASIC15.7■□□□□ 0.1
BMP4P12644 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
BMP4P12644 AC092384.3-202ENST00000564646 2873 ntBASIC15.7■□□□□ 0.1
BMP4P12644 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
BMP4P12644 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.7■□□□□ 0.1
BMP4P12644 SDHAP2-201ENST00000455183 2001 ntBASIC15.7■□□□□ 0.1
BMP4P12644 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BMP4P12644 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BMP4P12644 AC078925.2-201ENST00000624013 1973 ntBASIC15.69■□□□□ 0.1
BMP4P12644 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.69■□□□□ 0.1
BMP4P12644 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
BMP4P12644 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
BMP4P12644 Z83836.1-201ENST00000624605 1642 ntBASIC15.69■□□□□ 0.1
BMP4P12644 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
BMP4P12644 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BMP4P12644 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.69■□□□□ 0.1
BMP4P12644 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.69■□□□□ 0.1
BMP4P12644 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
BMP4P12644 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.69■□□□□ 0.1
BMP4P12644 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.69■□□□□ 0.1
BMP4P12644 NUS1P1-201ENST00000446295 882 ntBASIC15.69■□□□□ 0.1
BMP4P12644 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.69■□□□□ 0.1
BMP4P12644 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.69■□□□□ 0.1
BMP4P12644 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.69■□□□□ 0.1
BMP4P12644 AC111152.3-201ENST00000569699 673 ntBASIC15.69■□□□□ 0.1
BMP4P12644 AC005332.3-201ENST00000589904 676 ntBASIC15.69■□□□□ 0.1
BMP4P12644 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 GPR32P1-201ENST00000601788 811 ntBASIC15.69■□□□□ 0.1
BMP4P12644 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.69■□□□□ 0.1
BMP4P12644 KRT89P-201ENST00000620027 1478 ntBASIC15.69■□□□□ 0.1
BMP4P12644 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.69■□□□□ 0.1
BMP4P12644 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
BMP4P12644 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.69■□□□□ 0.1
BMP4P12644 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BMP4P12644 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms