Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.67■□□□□ 0.26
PCNAP12004 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.67■□□□□ 0.26
PCNAP12004 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PCNAP12004 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.67■□□□□ 0.26
PCNAP12004 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.67■□□□□ 0.26
PCNAP12004 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 KRT16P4-201ENST00000453883 522 ntBASIC16.67■□□□□ 0.26
PCNAP12004 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.67■□□□□ 0.26
PCNAP12004 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
PCNAP12004 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.67■□□□□ 0.26
PCNAP12004 AC105020.1-201ENST00000435356 2205 ntBASIC16.67■□□□□ 0.26
PCNAP12004 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PCNAP12004 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.67■□□□□ 0.26
PCNAP12004 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 PMPCAP1-201ENST00000508114 1576 ntBASIC16.67■□□□□ 0.26
PCNAP12004 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.67■□□□□ 0.26
PCNAP12004 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
PCNAP12004 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCNAP12004 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCNAP12004 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCNAP12004 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 SLC25A1P3-201ENST00000395415 828 ntBASIC16.66■□□□□ 0.26
PCNAP12004 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.66■□□□□ 0.26
PCNAP12004 AC060834.1-201ENST00000443027 2032 ntBASIC16.66■□□□□ 0.26
PCNAP12004 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.66■□□□□ 0.26
PCNAP12004 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.66■□□□□ 0.26
PCNAP12004 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.66■□□□□ 0.26
PCNAP12004 AL732292.2-201ENST00000609649 430 ntBASIC16.66■□□□□ 0.26
PCNAP12004 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 AC008741.2-201ENST00000612792 3115 ntBASIC16.66■□□□□ 0.26
PCNAP12004 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
PCNAP12004 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCNAP12004 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCNAP12004 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCNAP12004 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCNAP12004 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCNAP12004 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.65■□□□□ 0.26
PCNAP12004 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 LINC02012-201ENST00000608206 1725 ntBASIC16.65■□□□□ 0.26
PCNAP12004 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.65■□□□□ 0.26
PCNAP12004 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCNAP12004 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.65■□□□□ 0.26
PCNAP12004 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.65■□□□□ 0.26
PCNAP12004 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.65■□□□□ 0.26
PCNAP12004 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.65■□□□□ 0.26
PCNAP12004 AL020989.1-201ENST00000422979 469 ntBASIC16.65■□□□□ 0.26
PCNAP12004 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCNAP12004 ABCD1P5-201ENST00000445663 754 ntBASIC16.65■□□□□ 0.26
PCNAP12004 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.65■□□□□ 0.26
PCNAP12004 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PCNAP12004 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.65■□□□□ 0.26
PCNAP12004 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCNAP12004 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 AP000867.4-201ENST00000641616 219 ntBASIC16.65■□□□□ 0.26
PCNAP12004 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 AC148477.5-201ENST00000625164 1645 ntBASIC16.65■□□□□ 0.26
PCNAP12004 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCNAP12004 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms