Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.92■□□□□ 0.46
RARAP10276 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RARAP10276 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RARAP10276 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.92■□□□□ 0.46
RARAP10276 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RARAP10276 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RARAP10276 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RARAP10276 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RARAP10276 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.92■□□□□ 0.46
RARAP10276 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RARAP10276 AL596257.1-201ENST00000641463 2694 ntBASIC17.92■□□□□ 0.46
RARAP10276 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RARAP10276 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RARAP10276 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RARAP10276 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 GPR89P-201ENST00000407924 1495 ntBASIC17.91■□□□□ 0.46
RARAP10276 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.91■□□□□ 0.46
RARAP10276 BX005266.1-201ENST00000473402 457 ntBASIC17.91■□□□□ 0.46
RARAP10276 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.91■□□□□ 0.46
RARAP10276 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.91■□□□□ 0.46
RARAP10276 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.91■□□□□ 0.46
RARAP10276 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.91■□□□□ 0.46
RARAP10276 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.91■□□□□ 0.46
RARAP10276 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.91■□□□□ 0.46
RARAP10276 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RARAP10276 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RARAP10276 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.9■□□□□ 0.46
RARAP10276 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.9■□□□□ 0.46
RARAP10276 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
RARAP10276 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.9■□□□□ 0.46
RARAP10276 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 LINC00982-205ENST00000420957 435 ntBASIC17.9■□□□□ 0.46
RARAP10276 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.9■□□□□ 0.46
RARAP10276 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.9■□□□□ 0.46
RARAP10276 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RARAP10276 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 PRELID1P1-202ENST00000567272 903 ntBASIC17.9■□□□□ 0.46
RARAP10276 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.9■□□□□ 0.46
RARAP10276 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.9■□□□□ 0.46
RARAP10276 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.9■□□□□ 0.46
RARAP10276 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.9■□□□□ 0.46
RARAP10276 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.9■□□□□ 0.46
RARAP10276 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RARAP10276 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.9■□□□□ 0.46
RARAP10276 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RARAP10276 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.89■□□□□ 0.45
RARAP10276 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
RARAP10276 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.89■□□□□ 0.45
RARAP10276 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RARAP10276 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.89■□□□□ 0.45
RARAP10276 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RARAP10276 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.89■□□□□ 0.45
RARAP10276 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.89■□□□□ 0.45
RARAP10276 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 RBM17P3-201ENST00000417687 1192 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms