Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AL590627.1-203ENST00000421194 1026 ntBASIC16.84■□□□□ 0.29
CAPN1P07384 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN1P07384 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.84■□□□□ 0.29
CAPN1P07384 AL671883.3-201ENST00000603274 991 ntBASIC16.84■□□□□ 0.29
CAPN1P07384 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.84■□□□□ 0.29
CAPN1P07384 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.84■□□□□ 0.29
CAPN1P07384 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN1P07384 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 AP005117.1-201ENST00000584346 1413 ntBASIC16.84■□□□□ 0.29
CAPN1P07384 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CAPN1P07384 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CAPN1P07384 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.84■□□□□ 0.29
CAPN1P07384 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPN1P07384 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CAPN1P07384 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN1P07384 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.84■□□□□ 0.29
CAPN1P07384 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.84■□□□□ 0.29
CAPN1P07384 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.84■□□□□ 0.29
CAPN1P07384 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CAPN1P07384 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.83■□□□□ 0.28
CAPN1P07384 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.83■□□□□ 0.28
CAPN1P07384 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 ABCD1P5-201ENST00000445663 754 ntBASIC16.83■□□□□ 0.28
CAPN1P07384 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 AF186996.4-201ENST00000467186 377 ntBASIC16.83■□□□□ 0.28
CAPN1P07384 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 RNPS1P1-201ENST00000507437 918 ntBASIC16.83■□□□□ 0.28
CAPN1P07384 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CAPN1P07384 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.83■□□□□ 0.28
CAPN1P07384 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.83■□□□□ 0.28
CAPN1P07384 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 AC120114.3-201ENST00000611923 658 ntBASIC16.83■□□□□ 0.28
CAPN1P07384 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPN1P07384 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CAPN1P07384 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CAPN1P07384 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPN1P07384 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 AGGF1P2-201ENST00000426656 2106 ntBASIC16.82■□□□□ 0.28
CAPN1P07384 AC005915.1-201ENST00000624912 2018 ntBASIC16.82■□□□□ 0.28
CAPN1P07384 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
CAPN1P07384 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 IL9RP2-201ENST00000423948 1312 ntBASIC16.82■□□□□ 0.28
CAPN1P07384 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.82■□□□□ 0.28
CAPN1P07384 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.82■□□□□ 0.28
CAPN1P07384 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 STK25P1-201ENST00000585406 838 ntBASIC16.82■□□□□ 0.28
CAPN1P07384 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.82■□□□□ 0.28
CAPN1P07384 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPN1P07384 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPN1P07384 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms