Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SLC25A1P3-201ENST00000395415 828 ntBASIC12.88□□□□□ -0.35
HLA-DQA1P01909 AC004980.1-204ENST00000429707 299 ntBASIC12.88□□□□□ -0.35
HLA-DQA1P01909 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 AC133681.1-201ENST00000465482 601 ntBASIC12.88□□□□□ -0.35
HLA-DQA1P01909 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 AL139327.4-201ENST00000612362 153 ntBASIC12.88□□□□□ -0.35
HLA-DQA1P01909 AL359736.2-201ENST00000621992 437 ntBASIC12.88□□□□□ -0.35
HLA-DQA1P01909 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DQA1P01909 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 PRORSD1P-201ENST00000295112 541 ntBASIC12.87□□□□□ -0.35
HLA-DQA1P01909 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 KRT18P23-201ENST00000435622 1283 ntBASIC12.87□□□□□ -0.35
HLA-DQA1P01909 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HLA-DQA1P01909 AC097376.2-205ENST00000610159 5334 ntBASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AL353807.1-201ENST00000427475 662 ntBASIC12.86□□□□□ -0.35
HLA-DQA1P01909 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.86□□□□□ -0.35
HLA-DQA1P01909 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms