Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE6O95741 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE6O95741 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CPNE6O95741 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
CPNE6O95741 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPNE6O95741 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE6O95741 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE6O95741 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE6O95741 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE6O95741 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE6O95741 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE6O95741 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE6O95741 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE6O95741 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.78■□□□□ 0.28
CPNE6O95741 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE6O95741 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CPNE6O95741 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE6O95741 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE6O95741 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE6O95741 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CPNE6O95741 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE6O95741 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CPNE6O95741 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE6O95741 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE6O95741 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE6O95741 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE6O95741 MCCD1P2-201ENST00000423228 335 ntBASIC16.77■□□□□ 0.28
CPNE6O95741 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE6O95741 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE6O95741 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE6O95741 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE6O95741 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.77■□□□□ 0.28
CPNE6O95741 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE6O95741 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE6O95741 AP001160.2-201ENST00000596071 487 ntBASIC16.77■□□□□ 0.28
CPNE6O95741 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE6O95741 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.77■□□□□ 0.28
CPNE6O95741 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CPNE6O95741 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE6O95741 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE6O95741 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE6O95741 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE6O95741 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
CPNE6O95741 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE6O95741 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.77■□□□□ 0.27
CPNE6O95741 CICP6-201ENST00000457191 2729 ntBASIC16.76■□□□□ 0.27
CPNE6O95741 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 KRT18P55-202ENST00000578578 1546 ntBASIC16.76■□□□□ 0.27
CPNE6O95741 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.76■□□□□ 0.27
CPNE6O95741 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE6O95741 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE6O95741 PCDHB19P-201ENST00000570871 2371 ntBASIC16.76■□□□□ 0.27
CPNE6O95741 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE6O95741 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.76■□□□□ 0.27
CPNE6O95741 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
CPNE6O95741 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE6O95741 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.76■□□□□ 0.27
CPNE6O95741 RPS8P6-201ENST00000426177 609 ntBASIC16.76■□□□□ 0.27
CPNE6O95741 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.76■□□□□ 0.27
CPNE6O95741 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.76■□□□□ 0.27
CPNE6O95741 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.76■□□□□ 0.27
CPNE6O95741 AC134684.3-201ENST00000641758 218 ntBASIC16.76■□□□□ 0.27
CPNE6O95741 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE6O95741 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CPNE6O95741 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE6O95741 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE6O95741 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.76■□□□□ 0.27
CPNE6O95741 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE6O95741 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE6O95741 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE6O95741 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE6O95741 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE6O95741 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 UBALD1-205ENST00000590891 2641 ntBASIC16.75■□□□□ 0.27
CPNE6O95741 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE6O95741 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms