Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PEX1O43933 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.7■□□□□ 0.26
PEX1O43933 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.7■□□□□ 0.26
PEX1O43933 AP000867.3-201ENST00000524675 377 ntBASIC16.7■□□□□ 0.26
PEX1O43933 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.7■□□□□ 0.26
PEX1O43933 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.7■□□□□ 0.26
PEX1O43933 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.7■□□□□ 0.26
PEX1O43933 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PEX1O43933 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PEX1O43933 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.69■□□□□ 0.26
PEX1O43933 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
PEX1O43933 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.69■□□□□ 0.26
PEX1O43933 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 TOB2P1-201ENST00000469761 992 ntBASIC16.69■□□□□ 0.26
PEX1O43933 GUSBP12-201ENST00000513727 720 ntBASIC16.69■□□□□ 0.26
PEX1O43933 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.69■□□□□ 0.26
PEX1O43933 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.69■□□□□ 0.26
PEX1O43933 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PEX1O43933 AL691432.3-201ENST00000621860 400 ntBASIC16.69■□□□□ 0.26
PEX1O43933 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PEX1O43933 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.69■□□□□ 0.26
PEX1O43933 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.69■□□□□ 0.26
PEX1O43933 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
PEX1O43933 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.69■□□□□ 0.26
PEX1O43933 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
PEX1O43933 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PEX1O43933 REXO1L11P-201ENST00000620964 1927 ntBASIC16.68■□□□□ 0.26
PEX1O43933 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.68■□□□□ 0.26
PEX1O43933 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PEX1O43933 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PEX1O43933 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.68■□□□□ 0.26
PEX1O43933 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
PEX1O43933 AL353692.3-201ENST00000407031 1396 ntBASIC16.68■□□□□ 0.26
PEX1O43933 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
PEX1O43933 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.68■□□□□ 0.26
PEX1O43933 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.68■□□□□ 0.26
PEX1O43933 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.68■□□□□ 0.26
PEX1O43933 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.68■□□□□ 0.26
PEX1O43933 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.68■□□□□ 0.26
PEX1O43933 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.68■□□□□ 0.26
PEX1O43933 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PEX1O43933 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PEX1O43933 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PEX1O43933 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms