Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD2O14647 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.31■■□□□ 1.32
CHD2O14647 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD2O14647 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CHD2O14647 AC093503.3-201ENST00000624917 2352 ntBASIC23.31■■□□□ 1.32
CHD2O14647 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD2O14647 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC23.31■■□□□ 1.32
CHD2O14647 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CHD2O14647 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CHD2O14647 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CHD2O14647 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CHD2O14647 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CHD2O14647 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD2O14647 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD2O14647 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CHD2O14647 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD2O14647 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CHD2O14647 AL021920.2-201ENST00000624828 1351 ntBASIC23.3■■□□□ 1.32
CHD2O14647 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHD2O14647 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD2O14647 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD2O14647 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHD2O14647 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.3■■□□□ 1.32
CHD2O14647 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC23.3■■□□□ 1.32
CHD2O14647 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHD2O14647 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD2O14647 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC23.3■■□□□ 1.32
CHD2O14647 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC23.3■■□□□ 1.32
CHD2O14647 RPSAP52-203ENST00000622976 1023 ntBASIC23.3■■□□□ 1.32
CHD2O14647 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHD2O14647 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CHD2O14647 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CHD2O14647 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CHD2O14647 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD2O14647 AL589987.1-201ENST00000453380 819 ntBASIC23.29■■□□□ 1.32
CHD2O14647 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD2O14647 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC23.29■■□□□ 1.32
CHD2O14647 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC23.29■■□□□ 1.32
CHD2O14647 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC23.29■■□□□ 1.32
CHD2O14647 WNT11-204ENST00000621122 789 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD2O14647 AL109936.8-201ENST00000641772 604 ntBASIC23.29■■□□□ 1.32
CHD2O14647 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
CHD2O14647 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHD2O14647 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD2O14647 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD2O14647 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC23.29■■□□□ 1.32
CHD2O14647 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD2O14647 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
CHD2O14647 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC23.29■■□□□ 1.32
CHD2O14647 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC23.29■■□□□ 1.32
CHD2O14647 MAX-210ENST00000555419 765 ntTSL 5 BASIC23.29■■□□□ 1.32
CHD2O14647 QPRT-203ENST00000562473 579 ntTSL 3 BASIC23.29■■□□□ 1.32
CHD2O14647 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC23.29■■□□□ 1.32
CHD2O14647 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD2O14647 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CHD2O14647 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD2O14647 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD2O14647 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CHD2O14647 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD2O14647 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD2O14647 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC23.28■■□□□ 1.32
CHD2O14647 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.28■■□□□ 1.32
CHD2O14647 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC23.28■■□□□ 1.32
CHD2O14647 BNIP3P42-201ENST00000454982 569 ntBASIC23.28■■□□□ 1.32
CHD2O14647 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.28■■□□□ 1.32
CHD2O14647 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.28■■□□□ 1.32
CHD2O14647 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 BNIP3P29-201ENST00000598302 571 ntBASIC23.28■■□□□ 1.32
CHD2O14647 AC011447.5-201ENST00000616168 564 ntBASIC23.28■■□□□ 1.32
CHD2O14647 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHD2O14647 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHD2O14647 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms