Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM38O00635 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM38O00635 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM38O00635 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRIM38O00635 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM38O00635 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRIM38O00635 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM38O00635 AC103564.2-201ENST00000432853 1299 ntBASIC17.2■□□□□ 0.34
TRIM38O00635 AC004967.1-201ENST00000453589 447 ntBASIC17.2■□□□□ 0.34
TRIM38O00635 AC136632.2-201ENST00000512891 861 ntBASIC17.2■□□□□ 0.34
TRIM38O00635 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM38O00635 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.2■□□□□ 0.34
TRIM38O00635 PGM5P2-202ENST00000637225 1043 ntBASIC17.2■□□□□ 0.34
TRIM38O00635 AC134684.3-201ENST00000641758 218 ntBASIC17.2■□□□□ 0.34
TRIM38O00635 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM38O00635 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
TRIM38O00635 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRIM38O00635 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRIM38O00635 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM38O00635 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM38O00635 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM38O00635 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 KRT18P2-201ENST00000447938 1258 ntBASIC17.19■□□□□ 0.34
TRIM38O00635 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 DUTP2-201ENST00000519164 463 ntBASIC17.19■□□□□ 0.34
TRIM38O00635 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM38O00635 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.19■□□□□ 0.34
TRIM38O00635 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM38O00635 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM38O00635 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM38O00635 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM38O00635 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM38O00635 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRIM38O00635 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM38O00635 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM38O00635 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM38O00635 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM38O00635 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM38O00635 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM38O00635 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM38O00635 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM38O00635 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM38O00635 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM38O00635 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM38O00635 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM38O00635 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM38O00635 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM38O00635 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM38O00635 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM38O00635 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM38O00635 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.18■□□□□ 0.34
TRIM38O00635 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms