Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN5O00501 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN5O00501 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.95■□□□□ 0.46
CLDN5O00501 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN5O00501 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLDN5O00501 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN5O00501 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.95■□□□□ 0.46
CLDN5O00501 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN5O00501 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN5O00501 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLDN5O00501 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN5O00501 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN5O00501 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN5O00501 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLDN5O00501 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN5O00501 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN5O00501 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN5O00501 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN5O00501 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN5O00501 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN5O00501 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN5O00501 AC112482.1-201ENST00000492080 688 ntBASIC17.94■□□□□ 0.46
CLDN5O00501 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN5O00501 PDPK2P-202ENST00000562415 1191 ntBASIC17.94■□□□□ 0.46
CLDN5O00501 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN5O00501 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN5O00501 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN5O00501 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.94■□□□□ 0.46
CLDN5O00501 AC007064.4-201ENST00000637740 555 ntBASIC17.94■□□□□ 0.46
CLDN5O00501 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN5O00501 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN5O00501 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN5O00501 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN5O00501 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN5O00501 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN5O00501 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 RPSAP43-201ENST00000402237 625 ntBASIC17.93■□□□□ 0.46
CLDN5O00501 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.93■□□□□ 0.46
CLDN5O00501 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN5O00501 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN5O00501 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN5O00501 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN5O00501 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN5O00501 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 AC092919.2-201ENST00000623631 1645 ntBASIC17.92■□□□□ 0.46
CLDN5O00501 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN5O00501 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN5O00501 UPF3AP3-201ENST00000420996 769 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms