Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXN3O00409 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN3O00409 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN3O00409 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.25■□□□□ 0.51
FOXN3O00409 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXN3O00409 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXN3O00409 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN3O00409 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXN3O00409 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
FOXN3O00409 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
FOXN3O00409 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXN3O00409 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
FOXN3O00409 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
FOXN3O00409 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
FOXN3O00409 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
FOXN3O00409 AL603756.1-201ENST00000606511 2163 ntBASIC18.24■□□□□ 0.51
FOXN3O00409 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXN3O00409 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXN3O00409 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXN3O00409 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXN3O00409 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXN3O00409 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXN3O00409 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXN3O00409 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 AC079328.2-201ENST00000561241 3354 ntBASIC18.23■□□□□ 0.51
FOXN3O00409 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXN3O00409 PCDHB19P-201ENST00000570871 2371 ntBASIC18.23■□□□□ 0.51
FOXN3O00409 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
FOXN3O00409 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXN3O00409 AC006504.4-201ENST00000592118 1568 ntBASIC18.23■□□□□ 0.51
FOXN3O00409 AL021920.2-201ENST00000624828 1351 ntBASIC18.23■□□□□ 0.51
FOXN3O00409 PTCHD3P3-201ENST00000403073 906 ntBASIC18.23■□□□□ 0.51
FOXN3O00409 EMBP1-201ENST00000458200 901 ntBASIC18.23■□□□□ 0.51
FOXN3O00409 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXN3O00409 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXN3O00409 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.23■□□□□ 0.51
FOXN3O00409 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXN3O00409 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
FOXN3O00409 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXN3O00409 PKD1P1-201ENST00000458669 6805 ntBASIC18.23■□□□□ 0.51
FOXN3O00409 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXN3O00409 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXN3O00409 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
FOXN3O00409 AL391256.1-201ENST00000443260 1855 ntBASIC18.22■□□□□ 0.51
FOXN3O00409 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXN3O00409 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXN3O00409 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXN3O00409 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms