Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLIC1O00299 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
CLIC1O00299 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLIC1O00299 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CLIC1O00299 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CLIC1O00299 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.11■□□□□ 0.17
CLIC1O00299 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 AL031133.1-201ENST00000406807 723 ntBASIC16.11■□□□□ 0.17
CLIC1O00299 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.11■□□□□ 0.17
CLIC1O00299 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.11■□□□□ 0.17
CLIC1O00299 TMPOP1-202ENST00000424642 1267 ntBASIC16.11■□□□□ 0.17
CLIC1O00299 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.11■□□□□ 0.17
CLIC1O00299 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.11■□□□□ 0.17
CLIC1O00299 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.11■□□□□ 0.17
CLIC1O00299 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.11■□□□□ 0.17
CLIC1O00299 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.11■□□□□ 0.17
CLIC1O00299 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.11■□□□□ 0.17
CLIC1O00299 AL121956.5-201ENST00000625261 221 ntBASIC16.11■□□□□ 0.17
CLIC1O00299 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.11■□□□□ 0.17
CLIC1O00299 HLA-A-202ENST00000376806 1854 ntBASIC16.11■□□□□ 0.17
CLIC1O00299 AC005332.1-201ENST00000577698 1310 ntBASIC16.11■□□□□ 0.17
CLIC1O00299 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 INTS4P1-201ENST00000438455 1935 ntBASIC16.11■□□□□ 0.17
CLIC1O00299 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 AC233702.3-201ENST00000578656 1387 ntBASIC16.11■□□□□ 0.17
CLIC1O00299 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLIC1O00299 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.11■□□□□ 0.17
CLIC1O00299 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLIC1O00299 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.1■□□□□ 0.17
CLIC1O00299 AL391256.1-201ENST00000443260 1855 ntBASIC16.1■□□□□ 0.17
CLIC1O00299 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLIC1O00299 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLIC1O00299 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 PMPCAP1-201ENST00000508114 1576 ntBASIC16.1■□□□□ 0.17
CLIC1O00299 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.1■□□□□ 0.17
CLIC1O00299 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.1■□□□□ 0.17
CLIC1O00299 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CLIC1O00299 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLIC1O00299 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.1■□□□□ 0.17
CLIC1O00299 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLIC1O00299 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.1■□□□□ 0.17
CLIC1O00299 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.1■□□□□ 0.17
CLIC1O00299 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
CLIC1O00299 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLIC1O00299 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLIC1O00299 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.09■□□□□ 0.17
CLIC1O00299 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.09■□□□□ 0.17
CLIC1O00299 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.09■□□□□ 0.17
CLIC1O00299 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.09■□□□□ 0.17
CLIC1O00299 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLIC1O00299 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLIC1O00299 ACTG1P4-201ENST00000425123 1122 ntBASIC16.09■□□□□ 0.17
CLIC1O00299 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CLIC1O00299 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms