Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 AL590787.1-201ENST00000568856 1315 ntBASIC17.24■□□□□ 0.35
AP3B1O00203 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
AP3B1O00203 AC078925.2-201ENST00000624013 1973 ntBASIC17.24■□□□□ 0.35
AP3B1O00203 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.24■□□□□ 0.35
AP3B1O00203 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 MIR1224-201ENST00000408193 85 ntBASIC17.24■□□□□ 0.35
AP3B1O00203 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 FOSL1P1-201ENST00000511041 816 ntBASIC17.24■□□□□ 0.35
AP3B1O00203 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.24■□□□□ 0.35
AP3B1O00203 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
AP3B1O00203 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.24■□□□□ 0.35
AP3B1O00203 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.24■□□□□ 0.35
AP3B1O00203 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
AP3B1O00203 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.24■□□□□ 0.35
AP3B1O00203 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
AP3B1O00203 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3B1O00203 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3B1O00203 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.23■□□□□ 0.35
AP3B1O00203 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP3B1O00203 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP3B1O00203 KRT8P49-201ENST00000604166 1432 ntBASIC17.23■□□□□ 0.35
AP3B1O00203 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3B1O00203 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3B1O00203 TNRC18P3-201ENST00000441896 2691 ntBASIC17.23■□□□□ 0.35
AP3B1O00203 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP3B1O00203 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 UPK3BP1-201ENST00000428678 509 ntBASIC17.23■□□□□ 0.35
AP3B1O00203 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3B1O00203 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP3B1O00203 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.23■□□□□ 0.35
AP3B1O00203 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
AP3B1O00203 LINC01711-201ENST00000598340 967 ntBASIC17.23■□□□□ 0.35
AP3B1O00203 TERC-201ENST00000602385 541 ntBASIC17.23■□□□□ 0.35
AP3B1O00203 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.23■□□□□ 0.35
AP3B1O00203 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.23■□□□□ 0.35
AP3B1O00203 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
AP3B1O00203 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
AP3B1O00203 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.22■□□□□ 0.35
AP3B1O00203 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
AP3B1O00203 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.22■□□□□ 0.35
AP3B1O00203 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
AP3B1O00203 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 LINC00895-201ENST00000629028 1637 ntBASIC17.22■□□□□ 0.35
AP3B1O00203 AC124067.4-201ENST00000519691 2379 ntBASIC17.22■□□□□ 0.35
AP3B1O00203 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.22■□□□□ 0.35
AP3B1O00203 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
AP3B1O00203 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
AP3B1O00203 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 FLJ38576-201ENST00000623820 2459 ntBASIC17.22■□□□□ 0.35
AP3B1O00203 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
AP3B1O00203 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
AP3B1O00203 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.22■□□□□ 0.35
AP3B1O00203 SCARNA2-201ENST00000458748 420 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms