Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 AL135744.1-201ENST00000565098 629 ntBASIC19.7■□□□□ 0.74
USP17L11C9JVI0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 AC005498.2-205ENST00000593218 784 ntBASIC19.7■□□□□ 0.74
USP17L11C9JVI0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 AL161645.1-201ENST00000622716 1255 ntBASIC19.7■□□□□ 0.74
USP17L11C9JVI0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.7■□□□□ 0.74
USP17L11C9JVI0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 SLC25A1P3-201ENST00000395415 828 ntBASIC19.69■□□□□ 0.74
USP17L11C9JVI0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 AC067863.1-201ENST00000494933 530 ntBASIC19.69■□□□□ 0.74
USP17L11C9JVI0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 DUX4L17-201ENST00000557360 1267 ntBASIC19.69■□□□□ 0.74
USP17L11C9JVI0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP17L11C9JVI0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 AC012569.1-201ENST00000591191 1524 ntBASIC19.68■□□□□ 0.74
USP17L11C9JVI0 PCDHB18P-201ENST00000524813 2368 ntBASIC19.68■□□□□ 0.74
USP17L11C9JVI0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 AC069335.1-201ENST00000489972 472 ntBASIC19.68■□□□□ 0.74
USP17L11C9JVI0 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 Z92544.3-201ENST00000624747 417 ntBASIC19.68■□□□□ 0.74
USP17L11C9JVI0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP17L11C9JVI0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms