Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TUBB7P-202ENST00000428444 1305 ntBASIC13.9□□□□□ -0.18
LINC00473A8K010 TUBB8P7-204ENST00000567960 1332 ntBASIC13.9□□□□□ -0.18
LINC00473A8K010 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00473A8K010 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00473A8K010 SIGLEC16-201ENST00000599858 1437 ntBASIC13.9□□□□□ -0.18
LINC00473A8K010 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00473A8K010 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LINC00473A8K010 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00473A8K010 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LINC00473A8K010 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LINC00473A8K010 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00473A8K010 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.9□□□□□ -0.18
LINC00473A8K010 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00473A8K010 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00473A8K010 AC012615.1-201ENST00000565797 1299 ntBASIC13.9□□□□□ -0.18
LINC00473A8K010 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00473A8K010 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00473A8K010 AC099336.1-202ENST00000602961 463 ntBASIC13.9□□□□□ -0.18
LINC00473A8K010 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00473A8K010 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00473A8K010 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00473A8K010 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
LINC00473A8K010 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00473A8K010 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00473A8K010 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 AL391256.1-201ENST00000443260 1855 ntBASIC13.89□□□□□ -0.19
LINC00473A8K010 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00473A8K010 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00473A8K010 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
LINC00473A8K010 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00473A8K010 ABCD1P5-201ENST00000445663 754 ntBASIC13.89□□□□□ -0.19
LINC00473A8K010 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00473A8K010 AP002490.2-201ENST00000524791 560 ntBASIC13.89□□□□□ -0.19
LINC00473A8K010 DUX4L17-201ENST00000557360 1267 ntBASIC13.89□□□□□ -0.19
LINC00473A8K010 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00473A8K010 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 AC069148.1-201ENST00000608741 768 ntBASIC13.89□□□□□ -0.19
LINC00473A8K010 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.89□□□□□ -0.19
LINC00473A8K010 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LINC00473A8K010 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00473A8K010 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00473A8K010 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00473A8K010 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.89□□□□□ -0.19
LINC00473A8K010 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00473A8K010 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00473A8K010 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.88□□□□□ -0.19
LINC00473A8K010 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00473A8K010 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00473A8K010 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00473A8K010 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00473A8K010 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00473A8K010 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LINC00473A8K010 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms