Protein–RNA interactions for Protein: A2RRP1

NBAS, Neuroblastoma-amplified sequence, humanhuman

Predictions only

Length 2,371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBASA2RRP1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.13■□□□□ 0.01
NBASA2RRP1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.13■□□□□ 0.01
NBASA2RRP1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 HCG4-201ENST00000418983 998 ntBASIC15.13■□□□□ 0.01
NBASA2RRP1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
NBASA2RRP1 AC007389.4-201ENST00000454674 793 ntBASIC15.13■□□□□ 0.01
NBASA2RRP1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.13■□□□□ 0.01
NBASA2RRP1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.13■□□□□ 0.01
NBASA2RRP1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.13■□□□□ 0.01
NBASA2RRP1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.13■□□□□ 0.01
NBASA2RRP1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.13■□□□□ 0.01
NBASA2RRP1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 MIR346-201ENST00000362234 95 ntBASIC15.13■□□□□ 0.01
NBASA2RRP1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.13■□□□□ 0.01
NBASA2RRP1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.13■□□□□ 0.01
NBASA2RRP1 AC104794.3-201ENST00000566840 1248 ntBASIC15.13■□□□□ 0.01
NBASA2RRP1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NBASA2RRP1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NBASA2RRP1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NBASA2RRP1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NBASA2RRP1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NBASA2RRP1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NBASA2RRP1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.12■□□□□ 0.01
NBASA2RRP1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NBASA2RRP1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.12■□□□□ 0.01
NBASA2RRP1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.12■□□□□ 0.01
NBASA2RRP1 MIR4525-201ENST00000580000 75 ntBASIC15.12■□□□□ 0.01
NBASA2RRP1 AC008738.7-201ENST00000609744 511 ntBASIC15.12■□□□□ 0.01
NBASA2RRP1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.12■□□□□ 0.01
NBASA2RRP1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.12■□□□□ 0.01
NBASA2RRP1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.12■□□□□ 0.01
NBASA2RRP1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.12■□□□□ 0.01
NBASA2RRP1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.12■□□□□ 0.01
NBASA2RRP1 AC027307.2-201ENST00000591252 911 ntBASIC15.12■□□□□ 0.01
NBASA2RRP1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NBASA2RRP1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NBASA2RRP1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NBASA2RRP1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 MYCLP1-201ENST00000372451 1075 ntBASIC15.11■□□□□ 0.01
NBASA2RRP1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.11■□□□□ 0.01
NBASA2RRP1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.11■□□□□ 0.01
NBASA2RRP1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.11■□□□□ 0.01
NBASA2RRP1 SNX29P1-201ENST00000548357 1007 ntBASIC15.11■□□□□ 0.01
NBASA2RRP1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.11■□□□□ 0.01
NBASA2RRP1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.11■□□□□ 0.01
NBASA2RRP1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.11■□□□□ 0.01
NBASA2RRP1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.11■□□□□ 0.01
NBASA2RRP1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.11■□□□□ 0.01
NBASA2RRP1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.11■□□□□ 0.01
NBASA2RRP1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 AL031598.1-201ENST00000561511 1773 ntBASIC15.11■□□□□ 0.01
NBASA2RRP1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.11■□□□□ 0.01
NBASA2RRP1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NBASA2RRP1 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.11■□□□□ 0.01
NBASA2RRP1 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.11■□□□□ 0.01
NBASA2RRP1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
NBASA2RRP1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms