Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV5A0A0B4J1U4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 AL021920.2-201ENST00000624828 1351 ntBASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 HMGA1P7-201ENST00000406908 502 ntBASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 HCG4-201ENST00000418983 998 ntBASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 FAM86C2P-203ENST00000528684 1004 ntBASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 AC105339.1-204ENST00000636249 355 ntBASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 AC068880.1-201ENST00000507289 2297 ntBASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRGV5A0A0B4J1U4 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 AL671277.1-201ENST00000429656 993 ntBASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 AC091167.2-201ENST00000579581 588 ntBASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 AL513210.1-201ENST00000629608 234 ntBASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV5A0A0B4J1U4 FRMD8P1-201ENST00000440433 1524 ntBASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 AL121761.2-201ENST00000598007 1648 ntBASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV5A0A0B4J1U4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms