Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 AC004461.1-201ENST00000412461 403 ntBASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 FAM86C2P-203ENST00000528684 1004 ntBASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CSNK1G3Q9Y6M4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 GNAS-203ENST00000306120 1878 ntBASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 AC140658.5-201ENST00000438532 169 ntBASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.68■□□□□ 0.26
CSNK1G3Q9Y6M4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 LINC00896-202ENST00000609602 2128 ntBASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 AC107918.2-201ENST00000530817 355 ntBASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 AC022145.2-201ENST00000598203 171 ntBASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 AC092919.2-201ENST00000623631 1645 ntBASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSNK1G3Q9Y6M4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 OR6D1P-202ENST00000641007 5290 ntBASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 LYSMD4-203ENST00000378904 2122 ntBASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSNK1G3Q9Y6M4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms